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AbstractThe non-polymorphic HLA-E molecule offers opportunities for new universal immunotherapeutic approaches to chronic infectious diseases. Chronic Hepatitis B virus (HBV) infection is driven in part by T cell dysfunction due to elevated levels of the HBV envelope (Env) protein hepatitis B surface antigen (HBsAg).
摘要非多态性HLA-E分子为慢性传染病的新的通用免疫治疗方法提供了机会。慢性乙型肝炎病毒(HBV)感染的部分原因是由于HBV包膜(Env)蛋白乙型肝炎表面抗原(HBsAg)水平升高导致的T细胞功能障碍。
Here we report the characterization of three genotypic variants of an HLA-E-binding HBsAg peptide, Env371-379, identified through bioinformatic predictions and verified by biochemical and cellular assays. Using a soluble affinity-enhanced T cell receptor (TCR) (a09b08)-anti-CD3 bispecific molecule to probe HLA-E presentation of the Env371-379 peptides, we demonstrate that only the most stable Env371-379 variant, L6I, elicits functional responses to a09b08-anti-CD3-redirected polyclonal T cells co-cultured with targets expressing endogenous HBsAg.
在这里,我们报告了通过生物信息学预测鉴定并通过生化和细胞测定验证的HLA-E结合HBsAg肽Env371-379的三种基因型变体的表征。使用可溶性亲和力增强的T细胞受体(TCR)(a09b08)-抗CD3双特异性分子来探测Env371-379肽的HLA-E呈递,我们证明只有最稳定的Env371-379变体L6I引发对与表达内源性HBsAg的靶标共培养的a09b08-抗CD3-重定向的多克隆T细胞的功能反应。
Furthermore, HLA-E-Env371-379 L6I-specific CD8+ T cells are detectable in HBV-naïve donors and people with chronic HBV after in vitro priming. In conclusion, we provide evidence for HLA-E-mediated HBV Env peptide presentation, and highlight the effect of viral mutations on the stability and targetability of pHLA-E molecules..
此外,HLA-E-Env371-379 L6I特异性CD8+T细胞在体外引发后在HBV初治供体和慢性HBV患者中可检测到。总之,我们为HLA-E介导的HBV Env肽呈递提供了证据,并强调了病毒突变对pHLA-E分子稳定性和靶向性的影响。。
IntroductionApproximately 2 billion people worldwide are infected with the hepatotropic Hepatitis B virus (HBV), with nearly 300 million being chronically infected. The annual mortality associated with chronic HBV infection is around 820,000 people, primarily from cirrhosis and hepatocellular carcinoma (HCC)1,2.
引言全世界约有20亿人感染了嗜肝乙型肝炎病毒(HBV),其中近3亿人长期感染。与慢性HBV感染相关的年死亡率约为820000人,主要来自肝硬化和肝细胞癌(HCC)1,2。
HCC is the sixth most common cancer and the fourth leading cause of cancer-related death globally, with almost 50% of cases associated with chronic HBV infection3,4,5. Although a highly effective vaccine is widely available and has led to a decline in acute and chronic HBV infections (CHB) worldwide, ~1.5 million new infections occur annually, and up to 15% of vaccinated individuals do not acquire protection against HBV infection2,6.CHB is defined by the detection of circulating envelope protein hepatitis B surface antigen (HBsAg) or HBV DNA for more than 6 months.
HCC是全球第六大常见癌症,也是全球第四大癌症相关死亡原因,近50%的病例与慢性HBV感染有关3,4,5。虽然一种高效疫苗已被广泛使用,并导致全世界急性和慢性HBV感染(CHB)的下降,但每年约有150万例新感染发生,高达15%的接种疫苗的个体无法获得针对HBV感染的保护2,6.CHB的定义是检测循环包膜蛋白乙型肝炎表面抗原(HBsAg)或HBV DNA超过6个月。
The major impediments to achieving a cure for HBV are the persistence of covalently closed circular DNA (cccDNA) located in the hepatocyte nucleus, which serves as a transcriptional template for various HBV RNAs, and the integration of HBV DNA into the host genome, which is a source of secreted HBsAg.
实现HBV治愈的主要障碍是位于肝细胞核中的共价闭合环状DNA(cccDNA)的持久性,其作为各种HBV RNA的转录模板,以及HBV DNA整合到宿主基因组中,这是分泌的HBsAg的来源。
Currently approved therapies for CHB are (1) nucleos(t)ide analogs (NAs), which suppress HBV replication but do not eliminate the viral reservoir and thus are a lifelong treatment; (2) pegylated interferon alpha-2a, which can drive cccDNA degradation leading to a cure in ~10% patients following a finite course of therapy but with limited use due to severe adverse effects.
目前批准的CHB治疗方法是(1)核苷类似物(NAs),其抑制HBV复制但不消除病毒库,因此是终身治疗;(2) 聚乙二醇化干扰素α-2a,可以驱动cccDNA降解,从而在有限的治疗过程中治愈约10%的患者,但由于严重的不良反应而使用有限。
These treatments reduce the risk of cirrhosis, liver failure, and HCC, but rarely lead to sustained loss of HBsAg and undetectable HBV DNA in serum after completion of treatment, which are prerequisites for a functional cure7,8,9. Thus,.
。因此,。
Data availability
数据可用性
The crystallography data generated in this study have been deposited in the RCSB protein data bank (PDB) with the accession codes 8RLT, 8RLU, and 8RLV. All data are included in the Supplementary Information or available from the authors, as are unique reagents used in this Article. The raw numbers for charts and graphs are available in the Source Data file whenever possible. Source data are provided with this paper..
本研究中产生的晶体学数据已保存在RCSB蛋白质数据库(PDB)中,登录号为8RLT,8RLU和8RLV。所有数据均包含在补充信息中或可从作者处获得,以及本文中使用的独特试剂。只要有可能,图表和图形的原始数字都可以在源数据文件中找到。本文提供了源数据。。
Code availability
代码可用性
Scripts for data processing and analysis are publicly available at https://github.com/Immunocore/FindPeptideOrthologs.
数据处理和分析的脚本可在https://github.com/Immunocore/FindPeptideOrthologs.
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Download referencesAcknowledgementsThe authors would like to thank Andrew Sewell (Cardiff University) and Peter Revill (Melbourne Health) for providing reagents; Daniel Fonseca for figure generation; Kate Vowell for sourcing patient sample material; Hussein Al-Mossawi and JoAnn Suzich for critical review of the manuscript; Giovanna Bossi, Lorraine Whaley, Nicola Smith, and Marco Lepore for scientific input.Author informationAuthor notesThese authors contributed equally: Gavuthami Murugesan, Rachel L.
下载参考文献致谢作者要感谢Andrew Sewell(加的夫大学)和Peter Revill(墨尔本健康)提供试剂;Daniel Fonseca用于图形生成;Kate Vonell负责采购患者样本材料;侯赛因·莫萨维和乔安·苏齐奇对手稿进行了批判性审查;乔瓦娜·博西(GiovannaBossi)、洛林·惠利(LorraineWhaley)、尼古拉·史密斯(NicolaSmith)和马尔科·莱波尔(MarcoLepore)提供科学意见。作者信息作者注意到这些作者做出了同样的贡献:Gavuthami Murugesan,Rachel L。
Paterson.Authors and AffiliationsImmunocore Ltd, 92 Park Drive, Abingdon, Oxfordshire, OX14 4RY, UKGavuthami Murugesan, Rachel L. Paterson, Rakesh Kulkarni, Veronica Ilkow, Richard J. Suckling, Mary M. Connolly, Vijaykumar Karuppiah, Robert Pengelly, Archana Jadhav, Jose Donoso, Tiaan Heunis, Wilawan Bunjobpol, Gwilym Philips, Kafayat Ololade, Daniel Kay, Anshuk Sarkar, Claire Barber, Ritu Raj, Carole Perot, Tressan Grant, Agatha Treveil, Andrew Walker, Marcin Dembek, Dawn Gibbs-Howe, Miriam Hock, Ricardo J.
帕特森。作者和附属机构Simmunocore Ltd,92 Park Drive,Abingdon,Oxfordshire,OX14 4RY,UKGavuthami Murugesan,Rachel L.Paterson,Rakesh Kulkarni,Veronica Ilkow,Richard J.Suckling,Mary M.Connolly,Vijaykumar Karuppiah,Robert Pengelly,Archana Jadhav,Jose Donoso,Tiaan Heunis,Wilawan Bunjobbol,Gwilym Philips,Kafayat Ololade,Daniel Kay,Anshuk Sarkar,Claire Barber,Ritu Raj,Carole Perot,特雷桑·格兰特,阿加莎·特雷维,安德鲁·沃克,马辛·登贝克,道恩·吉布斯·豪,米里亚姆·霍克,里卡多·J。
Carreira, Kate E. Atkin, Lucy Dorrell, Andrew Knox, Sarah Leonard, Mariolina Salio & Luis F. GodinhoAuthorsGavuthami MurugesanView author publicationsYou can also search for this author in.
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PubMed Google ScholarContributionsG.M., R.L.P., R.K., V.I., R.J.S., M.M.C., V.K., R.P., A.J., J.D., T.H., W.B., G.P., K.O., D.K., A.S., C.B., R.R., C.P., T.G., M.D., D.G., M.H., and L.F.G. performed the experimental studies. G.M., R.L.P., R.K., R.J.S., M.M.C., V.K., R.P., A.J., J.D., T.H., W.B., K.O., R.R., M.D., M.H., R.J.C., K.E.A., L.D., A.K., S.L., M.S., and L.F.G.
PubMed谷歌学术贡献。M、 ,R.L.P.,R.K.,V.I.,R.J.S.,M.M.C.,V.K.,R.P.,A.J.,J.D.,T.H.,W.B.,G.P.,K.O.,D.K.,A.S.,C.B.,R.R.,C.P.,T.G.,M.D.,D.G.,M.H.和L.F.G.进行了实验研究。G、 M.,R.L.P.,R.K.,R.J.S.,M.M.C.,V.K.,R.P.,A.J.,J.D.,T.H.,W.B.,K.O.,R.R.,M.D.,M.H.,R.J.C.,K.E.A.,L.D.,A.K.,S.L.,M.S.,和L.F.G。
carried out the analysis. A.T. and A.W. performed the computational studies. M.S. and L.F.G. supervised the work. G.M., R.L.P., R.K., V.I., V.K., R.P., T.H., L.D., M.S., and L.F.G. wrote the manuscript. All authors commented on the manuscript.Corresponding authorCorrespondence to.
。A、 T.和A.W.进行了计算研究。M、 S.和L.F.G.监督了这项工作。G.M.,R.L.P.,R.K.,V.I.,V.K.,R.P.,T.H.,L.D.,M.S。和L.F.G.撰写了手稿。所有作者都对稿件发表了评论。对应作者对应。
Luis F. Godinho.Ethics declarations
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相互竞争的利益
G.M., R.L.P., R.K., V.I., R.J.S., M.M.C., V.K., R.P., A.J., J.D., T.H., W.B., G.P., K.O., D.K., A.S., C.B., R.R., C.P., T.G., A.T., A.W., M.D., D.G., M.H., R.J.C., K.E.A., L.D., A.K., S.L., M.S., and L.F.G. are or were employees of Immunocore Ltd.
G、 M.,R.L.P.,R.K.,V.I.,R.J.S.,M.M.C.,V.K.,R.P.,A.J.,J.D.,T.H.,W.B.,G.P.,K.O.,D.K.,A.S.,C.B.,R.R.,C.P.,T.G.,A.T.,A.W.,M.D.,D.G.,M.H.,R.J.C.,K.E.A.,L.D.,A.K.,S.L.,M.S.和L.F.G.是或曾经是Immunocore Ltd.的员工。
Peer review
同行评审
Peer review information
同行评审信息
Nature Communications thanks Antonio Bertoletti, Michael Birnbaum, who co-reviewed with Lucy Walters and the other anonymous reviewer(s) for their contribution to the peer review of this work. A peer review file is available.
《自然通讯》感谢安东尼奥·贝托莱蒂(AntonioBertoletti)、迈克尔·伯恩鲍姆(MichaelBirnbaum),他们与露西·沃尔特斯(LucyWalters)和其他匿名审稿人共同审稿,感谢他们对这项工作的同行评议做出的贡献。可以获得同行评议文件。
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Reprints and permissionsAbout this articleCite this articleMurugesan, G., Paterson, R.L., Kulkarni, R. et al. Viral sequence determines HLA-E-restricted T cell recognition of hepatitis B surface antigen.
转载和许可本文引用本文Murugesan,G.,Paterson,R.L.,Kulkarni,R。等人。病毒序列决定了HLA-E限制性T细胞对乙型肝炎表面抗原的识别。
Nat Commun 15, 10126 (2024). https://doi.org/10.1038/s41467-024-54378-9Download citationReceived: 20 February 2024Accepted: 08 November 2024Published: 22 November 2024DOI: https://doi.org/10.1038/s41467-024-54378-9Share this articleAnyone you share the following link with will be able to read this content:Get shareable linkSorry, a shareable link is not currently available for this article.Copy to clipboard.
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